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Table 1 The list of operations in the segmentation and feature computation stages and the sources of the CPU and GPU versions

From: Scalable analysis of Big pathology image data cohorts using efficient methods and high-performance computing strategies

Segmentation Computations

Operation

CPU Implementation

GPU Implementation

Red Blood Cell Detection (RBC Detection)

Vincent [92] and OpenCV

Implemented

Morphological Open (Morph. Open)

OpenCV

OpenCV

Reconstruct to Nucleus (ReconToNuclei)

Vincent [92]

Implemented

Area Threshold

Implemented

Implemented

Fill Holes

Vincent [92]

Implemented

Pre-Watershed

Vincent [92], and OpenCV for distance transformation

Implemented

Watershed

OpenCV

Körbes [93]

Black and White Label (BWLabel)

Implemented

Implemented

  1. We used the implementation of the morphological reconstruction operation by Vincent for the implementation of several segmentation operations. Implemented indicates our implementation of the respective operations