Fig. 6
From: MixChIP: a probabilistic method for cell type specific protein-DNA binding analysis
The number of candidate binding sites has a small effect on binding site predictions. AUC values with different number of candidate binding sites for HepG2 (a) and K562 (b). A subset of candidate binding sites was randomly sampled from the original set of sites and this was repeated 20 times for each subset size. Black line shows the median AUC value among the 20 subsets and grey shaded area shows the 25 and 75 % quantiles