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Table 2 Databases and Tables used for miRNAs/targets interaction analysis

From: Bioinformatics approach to predict target genes for dysregulated microRNAs in hepatocellular carcinoma: study on a chemically-induced HCC mouse model

DB name

Considered table

Mirbase Data Base

mirnaTable

Microrna Data Base

gcpredSCTable

PITA Data Base

PITA_sites_mm9_0_0_ALL table

RNA22 Data Base

mus_musculus_ensembl 65 table

TargetScan Mouse Data Base

Conserved Family Info table

  1. The on-line DB (left) and the respective specific tables considered to extract targets’ information (right) are reported
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BMC Bioinformatics

ISSN: 1471-2105

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