Table 2 Average ranks of PCR measured fold change for top DEGs identified by different methods
DEGs | Our method | DEseq | eBayes | Fisher | Rankprod |
|---|---|---|---|---|---|
Top 10 | 21.8 | 52.1 | 40.5 | 47.4 | 18.2 |
Top 50 | 45.7 | 57.2 | 71.3 | 55.2 | 56.9 |
Top 100 | 69.4 | 91.5 | 92.5 | 89.3 | 99.4 |
DEGs | Our method | DEseq | eBayes | Fisher | Rankprod |
|---|---|---|---|---|---|
Top 10 | 21.8 | 52.1 | 40.5 | 47.4 | 18.2 |
Top 50 | 45.7 | 57.2 | 71.3 | 55.2 | 56.9 |
Top 100 | 69.4 | 91.5 | 92.5 | 89.3 | 99.4 |