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Table 1 Performance comparison across sample cohorts

From: The diagnostic application of RNA sequencing in patients with thyroid cancer: an analysis of 851 variants and 133 fusions in 524 genes

Performance of genetic alterations (Variants and Fusions)

   

Cancer prevalence used in calculation

   

PPV

NPV

Sample cohort

Sensitivity

Specificity

24 %

40 %

24 %

40 %

All VERA FNA (n = 88)

43 % (28–59)

84 % (70–93)

46 % (29–65)

64 % (46–79)

82 % (78–86)

69 % (62–75)

AUS/FLUS & FN/SFN only VERA FNA (n = 22)

33 % (1–91)

84 % (60–97)

40 % (9–82)

58 % (17–90)

80 % (64–90)

65 % (45–81)

Tissue (n = 63)

59 % (41–76)

74 % (55–88)

42 % (27–58)

61 % (44–75)

85 % (78–90)

73 % (63–81)

Combined VERA FNA and tissue (n = 151)

50 % (38–62)

80 % (69–88)

44 % (32–57)

63 % (50–73)

84 % (80–87)

71 % (65–76)