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Table 4 The numbers of DML disagreed by the proposed Bayesian method and the logistic regression method for the real data analysis. The nominal FDR levels of the logistic regression model are 0.01,0.02, 0.03 and 0.05. In the table, 0, 1 and 2 represent equal-, hypo- and hyper-methylated loci respectively

From: A full Bayesian partition model for identifying hypo- and hyper-methylated loci from single nucleotide resolution sequencing data

       Logistic regression  
   FDR 0.01   FDR 0.02   FDR 0.03   FDR 0.05
   0 1 2   0 1 2   0 1 2   0 1 2
Bayesian method 0   42 41    512 368    1,397 852    3,795 2,245
  1 10,843   0   7,531   0   5,553   0   3,260   0
  2 6,145 0    3,880 0    2,639 0    1,096 0