Table 4 Performance comparison of two-state classification: PredRSA vs. other existing predictors
From: PredRSA: a gradient boosted regression trees approach for predicting protein solvent accessibility
| Â | Accuracy for two-states prediction(%) | ||||||
|---|---|---|---|---|---|---|---|
Method | 5 % | 10 % | 20 % | 25 % | 30 % | 40 % | 50 % |
SARpred | 74.9 | 77.2 | 77.7 | - | 77.8 | 78.1 | 80.5 |
PR | 76.8 | 74.8 | 75.3 | 76.7 | 77.7 | 79.8 | 86.3 |
SVR | 80.9 | 80.1 | 78.7 | - | - | - | 80.8 |
Two-stageSVR | 81.1 | 78.7 | 77.6 | 77.3 | - | - | 79.5 |
PredRSA | 80.0 | 81.6 | 80.9 | 81.1 | 82.2 | 87.1 | 93.2 |