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Table 5 Parameter settings used for concept recognition systems

From: NOBLE – Flexible concept recognition for large-scale biomedical natural language processing

Concept recognition system Download reference Parameters changed from standard Goal achieved
MMTx [12] Best-mapping = false Overlap
MGrep [58] Longest match = true Subsumption
Concept Mapper [59] Contiguous match = true Contiguity
cTAKES Dictionary Lookup Annotator [21] N/A N/A
cTAKES Fast Dictionary Lookup Annotator [22] OverlapJCasTermAnnotator Overlap
PrecisionTermConsumer Subsumption
NOBLE Coder [57] Best Match Strategy Overlap
Contiguity
Subsumption