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Table 4 The p-values of 17 SNPs in gene DNAH9 for the association with Anti-CCP Measure

From: A two-phase procedure for non-normal quantitative trait genetic association study

snpid

KW

Z A

MAX3

TPP

Genetic model

α

rs9896319

0.0024

0.0542

0.0060

0.0031

REC

3.16×10−5

rs736626

0.1008

0.0337

0.0720

0.0337

ADD

2.98×10−5

rs4791473

0.0621

0.0214

0.0436

0.0214

ADD

2.99×10−5

rs12946617

0.1182

0.0459

0.0962

0.0459

ADD

3.75×10−5

rs7223160

0.0894

0.0289

0.0624

0.0289

ADD

2.98×10−5

rs7207282

0.1039

0.0345

0.0738

0.0345

ADD

2.98×10−5

rs11657375

0.1359

0.0412

0.0880

0.0412

ADD

3.29×10−5

rs11651010

0.0002

0.0001

0.0001

0.0001

ADD

3.03×10−5

rs3744580

0.0804

0.0390

0.0561

0.0390

ADD

2.99×10−5

rs11655963

1.18×10−4

8.40×10−5

7.44×10−5

2.72×10−5

REC

3.64×10−5

rs12936861

0.0529

0.0594

0.0336

0.0146

DOM

2.87×10−5

rs9896309

0.0356

0.1863

0.0446

0.0205

DOM

2.86×10−5

rs7215021

0.1275

0.0384

0.0715

0.0384

ADD

3.48×10−5

rs9303041

0.0507

0.1855

0.0327

0.0149

DOM

3.16×10−5

rs10445247

0.0481

0.0320

0.0491

0.0320

ADD

2.92×10−5

rs3764845

0.0719

0.0325

0.0698

0.0325

ADD

2.91×10−5

rs1990236

0.0622

0.0217

0.0365

0.0217

ADD

3.27×10−5

  1. α is the adjusted p-value threshold for 5×10−5. The sixth column (denoted by Genetic model) is the selected genetic model using the TPP in the first phase