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Table 1 Summary of properties of imputation methods under evaluation

From: Impact of imputation methods on the amount of genetic variation captured by a single-nucleotide polymorphism panel in soybeans

Method

Better fit for low heritability traits

High imputation accuracy

Enlarges LD blocks

Corrects Miscalls

Accommodates pedigree information

Suitable for unordered markers

Beagle

  

X

X

X

 

fastPHASE

X

X

 

X

  

findhap

    

X

X

kNN

     

X

MaCH

 

X

X

X

X

 

MMM

X

  

X

X

 

RF

 

X

   

X

SVD

     

X