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Table 1 General parameters

From: A novel molecular dynamics approach to evaluate the effect of phosphorylation on multimeric protein interface: the αB-Crystallin case study

Name

Type

Input for computation

Total SAS

Structural

Average value calculated on the eq trajectory

Hydrophobic SAS

Structural

Average value calculated on the eq trajectory

Buried SAS

Structural

Average value calculated on the eq trajectory

HB

Structural

Average value calculated on the eq trajectory

Gap_Index

Structural

Calculated on an average conformation

Volume

Structural

Calculated on an average conformation

E_LJ

Energetic

Average value calculated on the eq trajectory

AbsMin

Energetic

Calculated on FEL

#Min

Energetic

Calculated on FEL