Table 1 Benchmark of ClinQC with Illumina Paired-end data. We used 2x100bp paired-end reads with multiple sizes ranging from 1 million to 100 million pair reads. The execution time is measured in minutes
From: ClinQC: a tool for quality control and cleaning of Sanger and NGS data in clinical research
Number of read pairs (million) | Execution time (minutes) | Read length (bp) |
|---|---|---|
1 | 1.13 | 100 |
5 | 5.37 | 100 |
10 | 10.57 | 100 |
25 | 33.03 | 100 |
50 | 62.45 | 100 |
100 | 126.16 | 100 |