Table 1 Benchmark of ClinQC with Illumina Paired-end data. We used 2x100bp paired-end reads with multiple sizes ranging from 1 million to 100 million pair reads. The execution time is measured in minutes
From: ClinQC: a tool for quality control and cleaning of Sanger and NGS data in clinical research
| Number of read pairs (million) | Execution time (minutes) | Read length (bp) |
|---|---|---|
| 1 | 1.13 | 100 |
| 5 | 5.37 | 100 |
| 10 | 10.57 | 100 |
| 25 | 33.03 | 100 |
| 50 | 62.45 | 100 |
| 100 | 126.16 | 100 |