From: MetaCRAM: an integrated pipeline for metagenomic taxonomy identification and compression
Data | Original (MB) | Comp. (MB) | Processing time | Align. % | No. files | Comp. (MB) | Processing time | Align. % | No. files |
---|---|---|---|---|---|---|---|---|---|
ERR321482 | 1429 | 191 | 299 m 20 s | 26.99 | 211 | 193 | 239 m 28 s | 24.22 | 29 |
422 m 21 s | 3.57 | 1480 | 398 m 3 s | 6.5 | 1567 | ||||
12 m 24 s | 8 m 13 s | ||||||||
SRR359032 | 3981 | 319 | 127 m 34 s | 57.72 | 26 | 320 | 93 m 60 s | 57.71 | 7 |
245 m 53 s | 9.7 | 30 | 206 m 18 s | 9.71 | 32 | ||||
8 m 37s | 7 m 27 s | ||||||||
ERR532393 | 8230 | 948 | 639 m 55 s | 45.78 | 267 | 963 | 522 m | 42.45 | 39 |
1061 m 50 s | 1.98 | 1456 | 1067 m 49 s | 7.16 | 1639 | ||||
73 m 59 s | 28 m 13s | ||||||||
SRR1450398 | 5399 | 703 | 440 m 4 s | 7.14 | 190 | 703 | 364 m 34 s | 6.82 | 26 |
866 m 56 s | 0.6 | 793 | 790 m 52 s | 0.91 | 818 | ||||
21 m 2 s | 17 m 38 s | ||||||||
SRR062462 | 6478 | 137 | 217 m 21 s | 2.55 | 278 | 139 | 197 m 15 s | 2.13 | 50 |
254 m 26 s | 0.13 | 570 | 241 m 2 s | 0.51 | 656 | ||||
15 m 45 s | 19 m 31 s |