Skip to main content
Fig. 6 | BMC Bioinformatics

Fig. 6

From: Characterization of multiple sequence alignment errors using complete-likelihood score and position-shift map

Fig. 6

Different features of indel count misestimations by MAFFT (iterative) and Prank. a,c,e Via MAFFT, E-INS-i (i.e., iterative). b,d,f Via Prank. a,b With 12 primates. c,d With 15 mammals. e,f With 9 fast-evolving (FE) mammals. Each panel shows a 2-dimensional distribution of two measures of indel count misestimations, namely, the L1 distance (abscissa) and the deletion bias (ordinate). See section  M8 of Methods for the definitions of the measures. Each of the integers is the count of erroneous segments whose L1 distance and deletion bias belong to the specified classes

Back to article page