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Table 2 Percentages of aligned reads for replicate 1 of MAFK data

From: Systematic evaluation of the impact of ChIP-seq read designs on genome coverage, peak identification, and allele-specific binding detection

Design

v0

v1

v2

v3

q20o1Uni

q20o1UR

q20o1

SE36

76.76

81.95

82.68

83.00

82.90

82.9

97.49

SE50

78.39

85.30

86.37

86.84

87.24

87.24

96.90

SE75

77.46

86.82

88.36

88.96

90.34

90.34

95.95

SE101

74.45

85.86

87.96

88.72

91.20

91.20

95.35

PE36

75.27

84.40

84.68

84.40

75.45

88.79

95.84

PE50

73.41

85.48

86.56

86.74

81.87

91.21

95.91

PE75

68.39

84.19

86.32

86.85

86.80

92.75

95.77

PE101

63.05

81.55

84.76

85.66

88.28

93.12

95.45