Computational methods for ubiquitination site prediction using physicochemical properties of protein sequences

BMC Bioinformatics

Table 3 Statistical analysis and comparisons between EBMC and other methods for ubiquitination site prediction

Data Type		All	Balanced	UnBalanced	Large-scale
EBMC : NB	Outperformance %	20.12	25.87	14.25	19.22
EBMC : NB	p-Value	0.0007	0.0072	0.0118	0.0132
EBMC : FSNB	Outperformance %	16.37	18.09	14.80	13.65
EBMC : FSNB	p-Value	0.0004	0.0047	0.0628	0.0082
EBMC : MANB	Outperformance %	15.18	22.47	8.03	16.14
EBMC : MANB	p-Value	0.0056	0.0146	0.0284	0.0271
EBMC : SVM	Outperformance %	2.77	6.17	−0.64	2.57
EBMC : SVM	p-Value	0.3108	0.0950	0.7854	0.5527
EBMC : LR	Outperformance %	−2.48	−1.06	−3.80	−3.94
EBMC : LR	p-Value	0.3687	0.7238	0.5051	0.3268
EBMC : LASSO	Outperformance %	15.51	4.32	26.80	19.05
EBMC : LASSO	p-Value	0.0359	0.3800	0.0189	0.0461

ISSN: 1471-2105