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Table 6 The table shows the models selected for all methods and the five studied chromosomes for stop codon recognition

From: Stepwise approach for combining many sources of evidence for site-recognition in genomic sequences

    CE AC DM OA HS OC BT
Chrom. Obj. # S C K P W S C K P W S C K P W S C K P W S C K P W S C K P W S C K P W
1 auROC 4                                    
  auPRC 22                                 X X   
  G 2                                    
3 auROC 4                                    
  auPRC 10                   X           X      X   
  G 4 X                                   
13 auROC 5                                    
  auPRC 20                   X                X   
  G 6                                    X
19 auROC 5                                    
  auPRC 15                   X      X      X      X   
  G 2                                    
21 auROC 4                                    
  auPRC 18                   X                  
  G 2                                    
    CJ FA EC CLF GG MD SM
Chrom. Obj. # S C K P W S C K P W S C K P W S C K P W S C K P W S C K P W S C K P W
1 auROC 4                   X                  
  auPRC 22   X            X                X        
  G 2                                    
3 auROC 4                   X                  
  auPRC 10                                    
  G 4      X           X                     
13 auROC 5      X         X      X                  
  auPRC 20   X           X X        X         X        
  G 6      X                               
19 auROC 5      X         X                       
  auPRC 15   X X           X                       
  G 2                                    
21 auROC 4              X                       
  auPRC 18            X                         
  G 2                                    
0    MM DR MaM TR PT SS RN
Chrom. Obj. # S C K P W S C K P W S C K P W S C K P W S C K P W S C K P W S C K P W
1 auROC 4                X           X           
  auPRC 22      X        X X   X    X   X   X       X    X     
  G 2                X           X           
3 auROC 4                X           X           
  auPRC 10      X         X      X      X             
  G 4                X                     
13 auROC 5                X           X           
  auPRC 20    X   X        X X        X   X       X        
  G 6                X           X           
19 auROC 5                X           X           
  auPRC 15    X   X                X                
  G 2                X           X           
21 auROC 4                X           X           
  auPRC 18    X   X        X         X   X X             
  G 2                X           X           
    BT.RNA DR.RNA HS.RNA MM.RNA RN.RNA SS.RNA XT.RNA
Chrom. Obj. # S C K P W S C K P W S C K P W S C K P W S C K P W S C K P W S C K P W
1 auROC 4                           X          
  auPRC 22    X        X        X X         X   X    X   X   
  G 2                                    
3 auROC 4                           X          
  auPRC 10                           X   X    X     
  G 4                                    
13 auROC 5                           X          
  auPRC 20         X   X       X           X      X     
  G 6                                X     
19 auROC 5                                X     
  auPRC 15    X        X         X         X   X    X     
  G 2                                    
21 auROC 4                           X          
  auPRC 18   X X      X   X        X       X     X X    X   X   
  G 2                                    
  1. S stands for stop codon method, C for C4.5, K for k-NN, P for PWM and W for a SVM with a WD string kernel