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Table 2 Overview of the most common motifs for GAII, HiSeq and MiSeq

From: Illumina error profiles: resolving fine-scale variation in metagenomic sequencing data

Platform R1/R2 1st motif 2nd motif 3rd motif
GAII R1 CGG GGG GCG
GAII R2 CGG GGG CCG
HiSeq R1 GGG CGG AGG
HiSeq R2 GGG CGG AGG
MiSeq R1 GGG CGG TGG
MiSeq R2 GGG CGG GCG