Table 2 Overview of the most common motifs for GAII, HiSeq and MiSeq
From: Illumina error profiles: resolving fine-scale variation in metagenomic sequencing data
Platform | R1/R2 | 1st motif | 2nd motif | 3rd motif |
|---|---|---|---|---|
GAII | R1 | CGG | GGG | GCG |
GAII | R2 | CGG | GGG | CCG |
HiSeq | R1 | GGG | CGG | AGG |
HiSeq | R2 | GGG | CGG | AGG |
MiSeq | R1 | GGG | CGG | TGG |
MiSeq | R2 | GGG | CGG | GCG |