Fig. 5
From: Modeling the integration of bacterial rRNA fragments into the human cancer genome
A model of the Pseudomonas 16S rRNA gene fragment integration at the 18 bp of CEACAM5 from participant B is illustrated (a). Based on the JSD (b) and AD (c) calculations, the model has 0 bp between the bacterial and human fragment consensus sequences. After removing the potential outlier paired-end read, the optimum structure for the integration is illustrated in d. By removing the potential outlier read, both the JSD and AD decreased (e & f), supporting that there are 7 bp between the two fragments. This indicates the Pseudomonas 16S rRNA likely integrated between positions 45–53 bp of CEACAM5