From: Modeling the integration of bacterial rRNA fragments into the human cancer genome
Name | Min JSD | JSD dist. bp | Integration site | Min. AD | AD dist. bp | Bacterial fragment | Human fragment |
---|---|---|---|---|---|---|---|
A_16S__C5 | 0.748 | 26 | 48–73 | 16 | 11–17 | 354–454 | 74–147 |
A_23S1_C5 | 0.776 | 22 | 51–72 | 4.33 | 33 | 1308–1385 | 73–145 |
A_23S2_C5 | 0.785 | 32 | 49–80 | 12.67 | 29 | 1626–1699 | 81–157 |
B_16S__C5 | 0.743 | 0 | 18 | 30.82 | 0 | 324–449 | 19–148 |
B_16Sa_C5 | 0.722 | 7 | 47–53 | 19.10 | 0–6 | 331–449 | 54–148 |
B_23S__C5 | 0.795 | 35 | 59–93 | 12 | 30–54 | 1626–1701 | 94–145 |
A_16S__C6 | 0.768 | 19 | 59–77 | 17.60 | 17 | 329–454 | 78–168 |
C_16S__C6 | 0.720 | 23 | 50–72 | 17.89 | 31 | 321–456 | 73–140 |
D_16S1_CD | 0.802 | 2 | 180–187 | 27.50 | 0–20 | 563–708 | 188–278 |
D_16S2_CD | 0.802 | 41 | 136–147 | 26.50 | 7–60 | 927–1022 | 184–241 |
D_23S__CD | 0.815 | 22 | 167–195 | 166.75 | 0 | 892–1323 | 196–306 |
E_16S1_CD | 0.809 | 48 | 163–205 | 46 | 0–65 | 589–697 | 206–290 |
E_23S1_CD | 0.791 | 31 | 201–225 | 0.50 | 44–45 | 907–978 | 226–296 |
E_23S2_CD | 0.782 | 28 | 170–191 | 29 | 0–38 | 1255–1379 | 192–269 |
F_16S_T10 | 0.812 | 19 | (−5)–13 | 169.44 | 0 | 701–927 | 14–196 |