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Table 2 List of databases and reference genomes

From: MutSpec: a Galaxy toolbox for streamlined analyses of somatic mutation spectra in human and mouse cancer genomes

Reference genome

Related databases

Used in

hg19

refGene

MutSpec-Stat

 

genomicSuperDups

MutSpec-Filter

 

snp138

MutSpec-Filter

 

snp138NonFlagged

MutSpec-Filter

 

1000 genome (ALL)

MutSpec-Filter

 

esp6500siv2 (ALL)

MutSpec-Filter

mm9

refGene

MutSpec-Stat

 

genomicSuperDups

MutSpec-Filter

 

snp128

MutSpec-Filter