Table 1 Percentage variance explained (R2) in out-of-bag (OOB) prediction by Random Forest (RF) models using all genes, LC-peaks, GC-peaks or proteins separately
From: Integration of multi-omics data for prediction of phenotypic traits using random forest
Quality trait | Gene expression | LC peaks | GC peaks | Proteins |
|---|---|---|---|---|
Flesh colour | 58Â % | 63Â % | 10Â % | 53Â % |
Tuber shape | 32Â % | NS | NS | NS |
DSC Onset | 42Â % | NS | 12Â % | 22Â % |
Enzymatic discoloration | 14Â % | 16Â % | NS | 13Â % |