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Table 7 Error rates in real ENCODE data using shadow linear regression and smoothing spline approaches

From: Empirical estimation of sequencing error rates using smoothing splines

Samples

SRER

EER_CS

EER_RS

SRR002053

0.4134

0.4469

0.4453

SRR002056

0.3225

0.3020

0.3355

SRR002065

0.3842

0.3918

0.3913

SRR005092

0.4628

0.4884

0.4776

SRR005093

0.4090

0.4724

0.4013

  1. SRER error rate estimated using shadow regression
  2. EER_CS empirical error rate estimated using cubic smoothing spline
  3. EER_RS empirical error rate estimated using robust smoothing spline
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BMC Bioinformatics

ISSN: 1471-2105

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