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Table 1 Description of phenotype texture measurements

From: Hierarchical classification strategy for Phenotype extraction from epidermal growth factor receptor endocytosis screening

Feature name

Expression

Description

std

\(f_{1}=\sqrt {\sum \limits _{i}(i-mean)^{2}H\,(i)}\)

The standard deviation of

  

intensity from all the pixels

  

in a region.

Smoothness

\(f_{2}=1-\frac {1}{(1+{f_{1}^{2}})}\)

The relative smoothness of the

  

intensity in a region. It is 0 for a

  

region of constant intensity and

  

1 for a region with large excursion

  

in the values of its intensity levels.

Skewness

\(f_{3}=\sum \limits _{i}(i-mean)^{3}H\,(i)\)

The order moment about the

  

mean. The departure from

  

symmetry about the mean

  

intensity. It is 0 for symmetric

  

histograms, positive for

  

histograms skewed to the right

  

and negative for histograms

  

skewed to the left.

Uniformity

\(f_{4}=\sum \limits _{i}H^{2}\,(i)\)

The sum of squared elements in

  

Histogram. It reaches maximum

  

when all intensity levels are equal

  

and decreases from there.

Entropy

\(f_{5}=-\sum \limits _{i}H(i)\log _{2}{H\,(i)}\)

The statistical measure of

  

randomness.

  1. i represents the intensity value
  2. H(i) is the histogram of intensity
  3. mean symbolizes the average intensity