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Table 16 Performance comparison of our method on gene expression data shuffled randomly using CYC2008 as benchmark

From: Construction of dynamic probabilistic protein interaction networks for protein complex identification

PPI data Gene expression data P R F Sn PPV Acc
Krogan GSE3431 0.468 0.475 0.471 0.364 0.729 0.515
Shuffled randomly 0.435 0.406 0.421 0.28 0.735 0.453
DIP GSE3431 0.483 0.471 0.477 0.373 0.694 0.509
Shuffled randomly 0.438 0.417 0.427 0.301 0.672 0.449
MIPS GSE3431 0.467 0.324 0.382 0.245 0.662 0.403
Shuffled randomly 0.427 0.294 0.348 0.201 0.671 0.367
  1. F: F-score, P: precision, R: recall