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Table 16 Performance comparison of our method on gene expression data shuffled randomly using CYC2008 as benchmark

From: Construction of dynamic probabilistic protein interaction networks for protein complex identification

PPI data

Gene expression data

P

R

F

Sn

PPV

Acc

Krogan

GSE3431

0.468

0.475

0.471

0.364

0.729

0.515

Shuffled randomly

0.435

0.406

0.421

0.28

0.735

0.453

DIP

GSE3431

0.483

0.471

0.477

0.373

0.694

0.509

Shuffled randomly

0.438

0.417

0.427

0.301

0.672

0.449

MIPS

GSE3431

0.467

0.324

0.382

0.245

0.662

0.403

Shuffled randomly

0.427

0.294

0.348

0.201

0.671

0.367

  1. F: F-score, P: precision, R: recall