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Table 17 Performance comparison of our method on gene expression data shuffled randomly using MIPS2006 as benchmark

From: Construction of dynamic probabilistic protein interaction networks for protein complex identification

PPI data Gene expression data P R F Sn PPV Acc
Krogan GSE3431 0.22 0.424 0.285 0.293 0.726 0.461
Shuffled randomly 0.207 0.355 0.262 0.212 0.73 0.393
DIP GSE3431 0.292 0.535 0.378 0.325 0.718 0.483
Shuffled randomly 0.253 0.461 0.326 0.253 0.693 0.419
MIPS GSE3431 0.336 0.401 0.372 0.24 0.683 0.405
Shuffled randomly 0.273 0.355 0.309 0.197 0.689 0.369
  1. F: F-score, P: precision, R: recall