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Table 2 Validations of predicted drug-PPI interactions

From: DrugGenEx-Net: a novel computational platform for systems pharmacology and gene expression-based drug repurposing

Drug Name

Protein #1 (direct binding partner)

Protein #2 (PPI)

Reference

Bicalutamide

ABL1

CASP9

Danquah et al. Pharm Res. 26(9):2081–92. (2009) [38]

 

ABL1

CCNA2

Katayama et al. Int J Oncol. 36(3):553–62. (2010) [39]

 

ABL1

MAPK11

Malinowska et al. Endocr Relat Cancer. 16:155–169. (2009) [40]

Cladribine

ADA

DCK

Sasvári-Székely et al. Biochem Pharmacol. 56(9):1175–1179. (1998) [41]

Chlordiazepoxide

AKT1

NR3C1

Curtin et al. Brain Behav, Immun. 23(4): 535–547. (2009) [42]

Progeterone

AR

F2

Oger et al. Arterioscler Thromb Vasc Biol. 23:1671–1676. (2003) [43]

Cyproterone

AR

CASP3

Eckle et al. Toxicol Pathol. 32:9–15. (2004) [44]

 

AR

NR3C1

Honer et al. Mol Pharmacol. 63(5):1012–1020. (2003) [45]

Telmisasrtan

BCL2

IL2

Syrbe et al. Hypertens Res. 30(6):521–527. (2007) [46]

Sorafenib

BRAF

PRKCQ

Jane et al. J Pharmacol Exp Ther. 319(3):1070–1080. (2006) [47]

Methotrexate

DHFR

CDK2

Maddika et al. J Cell Sci. 121:979–988. (2008) [48]