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Table 5 Summary of the two datasets analyzed in the case studies

From: A gene-signature progression approach to identifying candidate small-molecule cancer therapeutics with connectivity mapping

Dataset GSE19804 GSE15852
Disease Lung cancer Breast cancer
Samples Size 120 86
Samples Details 60 tumors 43 tumors
  60 normals 43 normals
Total Genes (Probesets) 22277 22283
Threshold P-value 1/22277 1/22283
Significant Genes 6316 1241
Expression filtered 6066 1229
Differential expression Filtered (Fold Change > 2) 1779 368
Gene Signature Progression optimal length 322 232
Potential drugs 10 10