Skip to main content
Fig. 9 | BMC Bioinformatics

Fig. 9

From: Parallel computation of genome-scale RNA secondary structure to detect structural constraints on human genome

Fig. 9

Gene structure and conformational change of the NEXN gene. a Gene structure of the NEXN gene. The GSDS tool has been used for visualization [57]. b Median difference of stem probability around each SS. The third SS shown with a red arrow is the most post-accessible SS among the genes in the cytoskeleton cluster. c Partial γ-centroid structure of pre-mRNA and mRNA (base pairs whose probability ≥0.5) around the third SS in the NEXN gene. For visualization, we only extracted the region of the substructure enclosed by the outermost pair or exterior loops around the 3rd intron in pre-mRNA and the 3rd exon junction in mRNA

Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us