Table 1 Adapter trimming benchmark results on real data (raw reads)
From: SeqPurge: highly-sensitive adapter trimming for paired-end NGS data
Adapters left | Bases left | |
|---|---|---|
no trimming | 414254 | 168509790 |
SeqPurge 0.1-270 | 0 | 142570393 |
AdapterRemoval 1.5.4 | 1450 | 142864048 |
Flexbar 2.5 | 7 | 142323263 |
PEAT 1.2.2 | 24298 | 146433832 |
SeqPrep 1.2 | 0 | 142069127 |
Skewer 0.1.123 | 425 | 142664746 |
Trimmomatic 0.32 | 5 | 142717579 |