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Table 4 Resources benchmark results on real data

From: SeqPurge: highly-sensitive adapter trimming for paired-end NGS data

  Trimming time Mapping time Variant calling time Memory usage
no trimming n/a 303 69 n/a
SeqPurge 0.1-270 38 182 65 28.8
AdapterRemoval 1.5.4 403 198 66 12.2
Flexbar 2.5 165 204 65 13.3
PEAT 1.2.2 43 241 73 672.7
SeqPrep 1.2 304 180 65 6.2
Skewer 0.1.123 24 200 66 5.7
Trimmomatic 0.32 58 177 66 220.9
  1. Benchmark results of single-thread processing times (in seconds) and peak memory usage (in MB). The most notable entries are highlighted (bold)