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Table 6 Undertrimmed base counts on simulated data

From: SeqPurge: highly-sensitive adapter trimming for paired-end NGS data

Error rate

SeqPurge

AdapterRemoval

SeqPrep

Skewer

0.00 %

0

0

0

0

0.50 %

0

0

866762

2927032

1.00 %

0

212

2029956

9321200

2.00 %

122

48190

3367375

36206230

4.00 %

4312

6233300

4248922

109562658

  1. Undertrimmed base counts on simulated data (5 million read pairs of 100 bp) with different rates of sequencing errors. The most notable entries are highlighted (bold)