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Table 2 A table showing if Kojak searched those missing identified peptides

From: ECL: an exhaustive search tool for the identification of cross-linked peptides using whole database

Data set

Number of peptides from the cross-linked peptides identified by ECL, but not by Kojak

Number of peptides that don’t belong to Kojak’s pre-selected peptides

Ratio

1

25

2

0.08

2

2

1

0.50

3

37

12

0.32

4

52

21

0.40

Total

116

36

0.31

  1. The second column contains the total numbers of peptides from the cross-linked peptides identified by ECL, but not by Kojak. The third column contains the numbers of peptides that don’t belong to Kojak’s pre-selected peptides. The forth column contains the ratios between the number in the third column and the number in the second column