Table 1 Gene annotation information in CrowdNodNet
From: Crowdsourcing the nodulation gene network discovery environment
Section | Description |
|---|---|
mRNA and protein sequences | FASTA sequences or links to UniProt or GenBank. If available, the probeset mapping of Affymetrix Lotus GeneChip® is also shown in this part. |
Mutants | Genotypes and phenotypes |
Biological functions | The detailed gene function during nodulation and/or arbuscular mycorrhizal (AM) symbiosis |
Gene expression | Expression patterns during nodulation and whether expressed in other organs, e.g. root, leaf, and stem. |
Interactions with other genes | Experimentally verified gene interactions, e.g. receptor-binding, phosphorylation reactions and protein complexes |
Gene evolution | Orthologs in legumes and non-legumes, and their functions in AM, actinorhizal and legume-rhizobial symbiosis |