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Fig. 5 | BMC Bioinformatics

Fig. 5

From: SCOUP: a probabilistic model based on the Ornstein–Uhlenbeck process to analyze single-cell expression data during differentiation

Fig. 5

PCA of cells of Kouno’s data based on gene expression. The cell colors indicate the genuine lineage (left), lineage estimated with SCOUP (middle), and lineage estimated with Monocle (right). The color for SCOUP is defined by γ c0; black, 0.5; red, 0.0; and blue, 1.0. The color for Monocle is defined by estimated states: black, state 1 (pre-bifurcation); red, state 2; and blue, state 3. The color of each state is defined to be consistent among each plots

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