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Table 3 P-values of DE analysis for four housekeeping genes in embryonic stem cells study

From: multiDE: a dimension reduced model based statistical method for differential expression analysis using RNA-sequencing data with multiple treatment conditions

Methods

ACTB

GAPDH

PGK1

PPIH

multiDE

0.5419

0.1064

0.2056

0.7460

edgeR

0.5351

0.1845

0.4914

0.9021

DESeq2

0.6540

0.0151

0.6484

0.9666