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Table 2 Test datasets for MSA

From: Parallel algorithms for large-scale biological sequence alignment on Xeon-Phi based clusters

Dataset

Avg. Length

#Sequences

Workload (GCells)

S 1

465

200

4.35

S 2

472

400

17.84

S 3

474

600

40.52

S 4

476

800

72.56

S 5

476

1000

113.54

S 6

480

1200

164.13

L 1

150

30000

10891

L 2

382

16000

18692

L 3

935

10000

39148

L 4

274

40000

60246

L 5

1350

10000

88013

L 6

700

24000

133112