Skip to main content

Table 2 Test datasets for MSA

From: Parallel algorithms for large-scale biological sequence alignment on Xeon-Phi based clusters

Dataset Avg. Length #Sequences Workload (GCells)
S 1 465 200 4.35
S 2 472 400 17.84
S 3 474 600 40.52
S 4 476 800 72.56
S 5 476 1000 113.54
S 6 480 1200 164.13
L 1 150 30000 10891
L 2 382 16000 18692
L 3 935 10000 39148
L 4 274 40000 60246
L 5 1350 10000 88013
L 6 700 24000 133112