TRaCE+: Ensemble inference of gene regulatory networks from transcriptional expression profiles of gene knock-out experiments

Table 2 Ensemble bound update using double-gene KOs in TRaCE and TRaCE+ (w _cut = 0 and w _cut = 0.3): Number of informative double-gene KOs for verifying uncertain edges and number of remaining uncertain edges after ensemble bound update

Network	TRaCE		TRaCE+ (w _cut = 0)		TRaCE+ (w _cut = 0.3)
Network	Informative experiments	Uncertain edges	Informative experiments	Uncertain edges	Informative experiments	Uncertain edges
1	36	15	24	20	20	21
2	27	1	24	1	22	1
3	61	37	52	30	50	27
4	49	81	43	67	27	92
5	46	37	44	37	44	37

ISSN: 1471-2105