Fig. 1From: A De-Novo Genome Analysis Pipeline (DeNoGAP) for large-scale comparative prokaryotic genomics studiesSchematic of the DeNoGAP analysis pipeline. Parallelograms represent input data. Rectangles indicate processes. Cylinders represent databases. The reference genome is used to initiate the construction of HMMs and seed the annotations. While any genome can be used as the reference genome, the use of a well-annotated finished (closed) genome is preferredBack to article page