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Table 2 Summary of gene prediction comparison and statistics

From: A De-Novo Genome Analysis Pipeline (DeNoGAP) for large-scale comparative prokaryotic genomics studies

Genome Name Glimmer GeneMark Prodigal FragScan Combined (15 / 50) Single (15 / 50) Total (15 / 50) Reference Set
PtoDC3000 5836 5944 5862 5950 5659 / 5716 695 / 721 6390 / 6437 5619
PsyB728a 5242 5273 5207 5469 5095 / 5135 662 / 673 5757 / 5808 5089
Pph1448A 5534 5667 5579 5622 5353 / 5416 634 / 661 5987 / 6077 5172
PAO1 5721 5701 5682 8491 4810 / 4927 3740 / 3837 8550 / 8764 5574
Pf01 5659 5798 5738 9045 4869 / 4953 4126 / 4230 8995 / 9183 5722