Table 6 Type I error rate simulations for two SNPs with MAFs of (0.2 and 0.2; 0.3 and 0.15) and with different numbers of DSPs at the significant levels of 0.05 and 0.01
MAF/number of DSPs | α = 0.05 | α = 0.01 |
|---|---|---|
MAF 0.2, 0.2 | ||
250 DSPs | 0.0486 | 0.0092 |
500 DSPs | 0.0494 | 0.0086 |
1000 DSPs | 0.0500 | 0.0106 |
MAF 0.3, 0.15 | ||
250 DSPs | 0.0502 | 0.0114 |
500 DSPs | 0.0484 | 0.0106 |
1000 DSPs | 0.0510 | 0.0124 |