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Table 8 Performance comparison for the GCORE-sib, PLINK, and MDR-PDT

From: GCORE-sib: An efficient gene-gene interaction tool for genome-wide association studies based on discordant sib pairs

SNP pairs

GCORE-sib

PLINK

MDR-PDT

1,000

0.2 s

3 s

43 m 57 s

5,000

1.4 s

16 s

3 h 29 m 32 s

10,000

2 s

26 s

6 h 52 m 36 s

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BMC Bioinformatics

ISSN: 1471-2105

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