Table 8 List of biological process GO terms significantly enriched and uniquely appearing in each topic for embryonic mouse cell differentiation
GO.ID | Term | p-Value |
|---|---|---|
Topic 1 | ||
GO:0032543 | mitochondrial translation | 2.2e-07 |
GO:0015031 | protein transport | 2.7e-07 |
GO:0015986 | ATP synthesis coupled proton transport | 1.8e-06 |
Topic 2 | ||
GO:0042254 | ribosome biogenesis | 7.1e-10 |
GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 7.2e-10 |
GO:0042273 | ribosomal large subunit biogenesis | 4.1e-08 |
Topic 3 | ||
GO:0007049 | cell cycle | 1.6e-09 |
GO:0045893 | positive regulation of transcription, DNA-templated | 1.5e-08 |
GO:0006355 | regulation of transcription, DNA-templated | 1.2e-07 |
GO:0000122 | negative regulation of transcription from RNA polymerase II promoter | 3.2e-07 |
GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | 5.5e-07 |
GO:0000281 | mitotic cytokinesis | 1.5e-06 |
Topic 4 | ||
GO:0055114 | oxidation-reduction process | < 1e-30 |
GO:0006805 | xenobiotic metabolic process | 3.5e-13 |
GO:0042738 | exogenous drug catabolic process | 1.9e-12 |
GO:0006749 | glutathione metabolic process | 4.3e-12 |
GO:1901606 | alpha-amino acid catabolic process | 6.9e-10 |
GO:0046700 | heterocycle catabolic process | 9.8e-10 |
GO:0008203 | cholesterol metabolic process | 1.0e-09 |
GO:0019373 | epoxygenase P450 pathway | 7.6e-09 |
GO:0044270 | cellular nitrogen compound catabolic process | 1.0e-08 |
GO:0006958 | complement activation, classical pathway | 1.2e-08 |
GO:0006641 | triglyceride metabolic process | 4.2e-08 |
GO:0045454 | cell redox homeostasis | 4.4e-08 |
GO:0019439 | aromatic compound catabolic process | 6.0e-08 |
GO:1901361 | organic cyclic compound catabolic process | 7.3e-08 |
GO:0030433 | ER-associated ubiquitin-dependent protein catabolic process | 1.2e-07 |
GO:0006953 | acute-phase response | 1.4e-07 |
GO:0010951 | negative regulation of endopeptidase activity | 2.7e-07 |
GO:0042493 | response to drug | 5.4e-07 |
GO:0006103 | 2-oxoglutarate metabolic process | 5.8e-07 |
GO:0042537 | benzene-containing compound metabolic process | 6.2e-07 |
GO:0010466 | negative regulation of peptidase activity | 9.0e-07 |
GO:0019748 | secondary metabolic process | 9.8e-07 |
GO:0006120 | mitochondrial electron transport, NADH to ubiquinone | 1.0e-06 |
GO:0042744 | hydrogen peroxide catabolic process | 1.0e-06 |
GO:0009813 | flavonoid biosynthetic process | 1.4e-06 |
GO:0052696 | flavonoid glucuronidation | 1.4e-06 |
GO:0046688 | response to copper ion | 1.5e-06 |