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Table 2 The running CPU time (seconds) for all methods in simulation studies

From: Statistical inference for time course RNA-Seq data using a negative binomial mixed-effect model

  

Setting 1

Setting 2

Setting 3

NBMM

1 Rep

7.133

6.182

7.261

 

3 Rep

6.240

6.271

7.000

maSigPro

1 Rep

0.215

0.025

0.200

 

3 Rep

0.235

0.091

0.236

DyNB

1 Rep

31944.470

NA

42513.210

 

3 Rep

36228.200

36335.970

40412.250

edgeR

1 Rep

0.004

0.001

0.001

 

3 Rep

0.001

0.001

0.001