Table 1 Artificial tumor samples. Coordinate list of the single nucleotide variants inserted in the artificial tumor samples and their variant allelic frequencies
Chromosome | Position | REF > ALT | Artificial tumors variant allelic frequencies | Normal variant allelic frequencies | ||
|---|---|---|---|---|---|---|
0.02 – 0.26 | 0.5 – 0.86 | 0.97 – 1 | ||||
11 | 19854088 | G > A | 0.03 | 0.69 | 1.00 | 0 |
11 | 36484167 | C > T | 0.08 | 0.62 | 1.00 | 0.027 |
11 | 4608116 | T > C | 0.13 | 0.71 | 1.00 | 0.020 |
11 | 4661826 | T > C | 0.11 | 0.60 | 0.97 | 0.028 |
11 | 4673788 | G > A | 0.26 | 0.64 | 1.00 | 0.021 |
11 | 4928841 | T > C | 0.13 | 0.61 | 1.00 | 0 |
11 | 5372856 | A > G | 0.24 | 0.69 | 1.00 | 0.023 |
11 | 5373562 | C > A | 0.09 | 0.68 | 1.00 | 0.029 |
11 | 5443887 | T > C | 0.10 | 0.86 | 1.00 | 0 |
11 | 5443893 | G > A | 0.10 | 0.86 | 1.00 | 0 |
11 | 5462255 | C > G | 0.16 | 0.56 | 1.00 | 0 |
11 | 5906203 | T > G | 0.19 | 0.70 | 1.00 | 0 |
11 | 6519642 | G > A | 0.08 | 0.61 | 1.00 | 0 |
11 | 824789 | T > C | 0.11 | 0.63 | 1.00 | 0.026 |
12 | 25398281 | C > T | 0.12 | 0.63 | 1.00 | 0 |
12 | 75715330 | C > A | 0.13 | 0.60 | 1.00 | 0 |
22 | 24891418 | A > C | 0.21 | 0.70 | 1.00 | 0.030 |
22 | 44083442 | T > C | NA | 0.78 | 1.00 | 0 |
13 | 101289801 | C > A | 0.13 | 0.65 | 1.00 | 0 |
20 | 61537337 | G > T | 0.13 | 0.65 | 1.00 | 0 |
17 | 48557299 | G > T | 0.11 | 0.74 | 1.00 | 0 |
5 | 45262378 | G > T | 0.08 | 0.50 | 1.00 | 0 |
1 | 94476902 | T > C | 0.15 | 0.65 | 1.00 | 0 |
2 | 110372199 | G > T | NA | 0.57 | 1.00 | 0 |
5 | 64907465 | C > A | 0.10 | 0.57 | 1.00 | 0 |