Table 5 The e-values of hits for PSI-blast search, profile HMM search and topology based PSI-blast search for topologies not yielding hits for PSI-blast, profile HMMs or both
From: Fold-specific sequence scoring improves protein sequence matching
| Â | E-values | ||
|---|---|---|---|
Topology | Psi-blast | HMM | Topology psi-blast |
1.10.150 | 1.00E-06 | no hit | 8.00E-18 |
1.10.238 | 3.00E-03 | no hit | 7.00E-38 |
1.10.533 | no hit | 3.30E-17 | 1.00E-30 |
1.10.1200 | no hit | 2.80E-05 | 5.00E-11 |
1.20.1250 | no hit | 1.10E-20 | 2.00E-44 |
2.40.128 | no hit | 3.00E-19 | 2.00E-59 |
2.60.40 | no hit | no hit | 1.00E-35 |
3.10.20 | no hits | no hit | 9.00E-25 |
3.30.420 | no hit | 5.00E-04 | 1.00E-48 |
3.30.450 | 3.00E-31 | no hit | 2.00E-52 |
3.40.630 | no hit | no hit | 1.00E-40 |
3.90.550 | no hit | 1.30E-06 | 1.00E-68 |