Table 5 Selected genes from adaptive lasso and each bag type (B1, B2, B3) based on biological reasons and PMSE and averaged PMSE over 100 bootstrap samples (B-PMSE) in the test data
| Â | Adaptive lasso | Bag type B1 | Bag type B2 | Bag type B3 |
|---|---|---|---|---|
| Â | AK3L1 | ADAMTS2 | ADAMTS2 | RARA |
| Â | CSRNP3 | RUNX2 | RUNX2 | CSRNP3 |
| Â | FKBP14 | SPTBN1 | SPTBN1 | VDR |
| Â | NF1 | NF1 | NF1 | CSNK1G3 |
| Â | PIAS4 | ESR1 | ESR1 | PIAS4 |
| Â | PLIN5 | PLIN5 | HGF | RHO |
| Â | PPIL2 | BMP5 | BMP5 | SRGAP3 |
| Â | RNF31 | RNF31 | RNF31 | GLP1R G |
| Â | SRR | SMAD3 | SRR | SRR |
| Â | TRPS1 | SFRP1 | SFRP1 | TRPS1 |
| Â | ZMAT3 | ZMAT3 | ZMAT3 | ZMAT3 |
PMSE | 1.292 | 0.251 | 0.343 | 1.306 |
B-PMSE | 1.074 | 0.242 | 0.298 | 1.286 |