Table 5 Overlap between the top subnetwork markers identified on different gene expression datasets
Chuang | HPRD | GASOLINE | Biogrid | ||
|---|---|---|---|---|---|
Greedy | 5.63 % | 4.05 % | 4.88 % | 3.96 % | |
AP-based | 24.90 % | 28.70 % | 27.71 % | 23.89 % | |
jac_p | 37.89 % | 29.28 % | 32.01 % | 31.97 % | |
kul_p | 15.38 % | 27.52 % | 26.49 % | 28.26 % | |
tve_p | 25.80 % | 44.15 % | 50.57 % | 42.33 % | |
jac_lc | β=0.25 | 39.10 % | 22.54 % | 26.55 % | 30.20 % |
β=0.5 | 53.51 % | 26.68 % | 26.87 % | 37.94 % | |
β=0.75 | 54.55 % | 31.74 % | 26.67 % | 40.12 % | |
kul_lc | β=0.25 | 12.73 % | 24.47 % | 27.90 % | 28.50 % |
β=0.5 | 39.86 % | 28.29 % | 31.18 % | 33.26 % | |
β=0.75 | 50.61 % | 35.53 % | 31.42 % | 40.73 % | |
tve_lc | β=0.25 | 27.53 % | 44.47 % | 46.75 % | 36.57 % |
β=0.5 | 32.14 % | 43.47 % | 52.41 % | 54.90 % | |
β=0.75 | 32.99 % | 50.94 % | 57.71 % | 69.05 % |