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Table 6 The number of genes in top 50 highly discriminative subnetwork markers from tve_p method on GASOLINE categorized by their GO terms

From: Incorporating topological information for predicting robust cancer subnetwork markers in human protein-protein interaction network

Ontology: Molecular function

GO term

GO id

GSE2034

NKI295

transporter activity

GO:0005215

240

251

translation regulator activity

GO:0045182

37

41

protein binding transcription factor activity

GO:0000988

35

42

enzyme regulator activity

GO:0030234

193

205

catalytic activity

GO:0003824

1146

1221

channel regulator activity

GO:0016247

5

6

receptor activity

GO:0004872

346

370

nucleic acid binding transcription factor activity

GO:0001071

307

316

antioxidant activity

GO:0016209

8

6

structural molecule activity

GO:0005198

226

260

binding

GO:0005488

1237

1330

Ontology: Cellular component

GO term

GO id

GSE2034

NKI295

synapse

GO:0045202

15

15

cell junction

GO:0030054

13

11

membrane

GO:0016020

288

290

macromolecular complex

GO:0032991

213

214

extracellular matrix

GO:0031012

50

58

cell part

GO:0044464

765

794

organelle

GO:0043226

411

441

extracellular region

GO:0005576

151

153

Ontology: Biological process

GO term

GO id

GSE2034

NKI295

cellular component organization or biogenesis

GO:0071840

278

309

cellular process

GO:0009987

1559

1679

localization

GO:0051179

536

577

apoptotic process

GO:0006915

174

194

reproduction

GO:0000003

104

118

biological regulation

GO:0065007

886

933

response to stimulus

GO:0050896

547

593

developmental process

GO:0032502

634

692

rhythmic process

GO:0048511

3

1

multicellular organismal process

GO:0032501

393

413

locomotion

GO:0040011

20

24

biological adhesion

GO:0022610

127

147

metabolic process

GO:0008152

1773

1876

growth

GO:0040007

1

3

immune system process

GO:0002376

314

342