Table 1 Details of soybean NGS resequencing datasets generated
From: PGen: large-scale genomic variations analysis workflow and browser in SoyKB
Datasets | Number of sequenced lines | Coverage | Raw Data Size (TB) | # of reads (Millions) | Data Source |
|---|---|---|---|---|---|
MSMC | 106 | 14.7 | 1.9 | 196.4 | Valliyodan et al. 2016 [3] |
USB Phase I | 300 | 17.6 | 3.63 | 194.40 | Unpublished |
USB Phase II | 50 | 44.2 | 1.97 | 486.24 | Unpublished |
Soja lines | 45 | 16.7 | 0.55 | 182.71 | Unpublished |
Brazilian lines | 28 | 14.8 | 0.34 | 184.87 | Maldonado et al. 2016 [22] |